Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | RCA23_RS00945 | Not Available | Positive | 206062 - 206985 | 34257.0 |
| hypothetical protein | RCA23_RS00950 | Not Available | Positive | 207091 - 207885 | 29139.5 |
| nadp-dependent phosphogluconate dehydrogenase | RCA23_RS00955 | Not Available | Positive | 207914 - 209323 | 49587.7 |
| atp-dependent helicase hrpb | RCA23_RS00960 | Not Available | Negative | 209328 - 211895 | 93189.0 |
| methylmalonyl co-a mutase-associated gtpase meab | RCA23_RS00965 | Not Available | Positive | 211993 - 212991 | 35743.0 |
| 50s ribosomal protein l28 | RCA23_RS00970 | Not Available | Positive | 213208 - 213495 | 10372.5 |
| hypothetical protein | RCA23_RS15870 | Not Available | Positive | 213684 - 214121 | 17057.4 |
| translation elongation factor 4 | RCA23_RS00980 | Not Available | Positive | 214253 - 216049 | 66608.6 |
| alpha/beta fold hydrolase | RCA23_RS00985 | Not Available | Negative | 216063 - 216827 | 27556.1 |
| voc family protein | RCA23_RS00990 | Not Available | Positive | 216901 - 217473 | 20744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
