Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate-coa ligase family protein | RCA23_RS09765 | Not Available | Negative | 2050304 - 2051839 | 55650.0 |
| 5-formyltetrahydrofolate cyclo-ligase | RCA23_RS09770 | Not Available | Negative | 2052070 - 2052630 | 19542.6 |
| magnesium transporter | RCA23_RS09775 | Not Available | Negative | 2052627 - 2054000 | 49758.9 |
| guanine deaminase | RCA23_RS09780 | Not Available | Positive | 2054072 - 2055358 | 46166.8 |
| 8-oxoguanine deaminase | RCA23_RS09785 | Not Available | Negative | 2055422 - 2056765 | 47825.4 |
| histidinol-phosphatase | RCA23_RS09790 | Not Available | Negative | 2056758 - 2057582 | 29390.0 |
| helix-turn-helix domain-containing protein | RCA23_RS09795 | Not Available | Negative | 2057688 - 2058047 | 13936.8 |
| nadph:quinone oxidoreductase family protein | RCA23_RS09800 | Not Available | Positive | 2058365 - 2059330 | 33614.9 |
| bax inhibitor-1 family protein | RCA23_RS09805 | Not Available | Positive | 2059480 - 2060259 | 27788.4 |
| 50s ribosomal protein l33 | RCA23_RS09810 | Not Available | Negative | 2060421 - 2060588 | 6310.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
