Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymdb family metallophosphoesterase | RCA23_RS09715 | Not Available | Negative | 2039483 - 2040307 | 29140.1 |
| osmc family protein | RCA23_RS09720 | Not Available | Negative | 2040358 - 2040825 | 17053.1 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RCA23_RS09725 | Not Available | Negative | 2041045 - 2043111 | 73869.3 |
| helix-turn-helix transcriptional regulator | RCA23_RS09730 | Not Available | Negative | 2043151 - 2044071 | 33784.8 |
| acyl-coa thioesterase | RCA23_RS09735 | Not Available | Negative | 2044068 - 2044526 | 17239.6 |
| benzoyl-coa 2,3-epoxidase subunit boxa | RCA23_RS09740 | Not Available | Negative | 2044510 - 2045700 | 43454.6 |
| benzoyl-coa 2,3-epoxidase subunit boxb | RCA23_RS09745 | Not Available | Negative | 2045734 - 2047185 | 54779.4 |
| 2,3-epoxybenzoyl-coa dihydrolase | RCA23_RS09750 | Not Available | Negative | 2047250 - 2048905 | 61286.0 |
| duf309 domain-containing protein | RCA23_RS09755 | Not Available | Negative | 2049049 - 2049492 | 16407.0 |
| alpha/beta fold hydrolase | RCA23_RS09760 | Not Available | Negative | 2049489 - 2050307 | 29784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
