Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | RCA23_RS09570 | Not Available | Negative | 2006419 - 2007468 | 39592.7 |
| choline dehydrogenase | RCA23_RS09575 | Not Available | Positive | 2007608 - 2009269 | 61055.6 |
| 3-oxoacid coa-transferase subunit b | RCA23_RS09580 | Not Available | Negative | 2009487 - 2010131 | 22276.9 |
| coa transferase subunit a | RCA23_RS09585 | Not Available | Negative | 2010131 - 2010826 | 25065.1 |
| hypothetical protein | RCA23_RS16020 | Not Available | Positive | 2011295 - 2011669 | 13559.0 |
| glycine cleavage t c-terminal barrel domain-containing protein | RCA23_RS09595 | Not Available | Negative | 2011751 - 2012857 | 40467.0 |
| hydantoinase/oxoprolinase family protein | RCA23_RS09600 | Not Available | Positive | 2013130 - 2015229 | 75001.9 |
| hydantoinase b/oxoprolinase family protein | RCA23_RS09605 | Not Available | Positive | 2015226 - 2016950 | 61554.5 |
| nad(p)/fad-dependent oxidoreductase | RCA23_RS09610 | Not Available | Positive | 2016951 - 2018159 | 44716.5 |
| nad-dependent epimerase/dehydratase family protein | RCA23_RS09615 | Not Available | Positive | 2018159 - 2018995 | 30423.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
