Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmi | RCA23_RS09475 | Not Available | Positive | 1987031 - 1988227 | 42882.1 |
| holliday junction resolvase ruvx | RCA23_RS09480 | Not Available | Positive | 1988224 - 1988700 | 17357.0 |
| duf1289 domain-containing protein | RCA23_RS09485 | Not Available | Positive | 1988697 - 1988945 | 9487.51 |
| hypothetical protein | RCA23_RS09490 | Not Available | Negative | 1989013 - 1989819 | 28986.3 |
| sulfite exporter taue/safe family protein | RCA23_RS09495 | Not Available | Negative | 1989810 - 1990628 | 28400.8 |
| trna dihydrouridine(20/20a) synthase dusa | RCA23_RS09500 | Not Available | Negative | 1990628 - 1991653 | 37689.6 |
| peroxiredoxin | RCA23_RS09505 | Not Available | Negative | 1991857 - 1992384 | 19549.2 |
| aldehyde dehydrogenase family protein | RCA23_RS09510 | Not Available | Negative | 1992418 - 1993440 | 36040.3 |
| thiamine pyrophosphate-dependent enzyme | RCA23_RS16010 | Not Available | Positive | 1993427 - 1993801 | 13549.8 |
| hypothetical protein | RCA23_RS16540 | Not Available | Negative | 1993836 - 1994144 | 11963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
