Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | RCA23_RS09375 | Not Available | Negative | 1961264 - 1962232 | 35211.9 |
| protein translocase subunit secd | RCA23_RS09380 | Not Available | Negative | 1962236 - 1963867 | 58169.5 |
| preprotein translocase subunit yajc | RCA23_RS09385 | Not Available | Negative | 1963912 - 1964193 | 10290.8 |
| serine--trna ligase | RCA23_RS09390 | Not Available | Positive | 1964441 - 1965733 | 46968.5 |
| hypothetical protein | RCA23_RS09395 | Not Available | Negative | 1965811 - 1966011 | 7474.16 |
| alpha/beta hydrolase | RCA23_RS09400 | Not Available | Positive | 1966135 - 1967112 | 36018.0 |
| ribosome biogenesis gtpase der | RCA23_RS09405 | Not Available | Negative | 1967283 - 1968740 | 53626.0 |
| pqq-like beta-propeller repeat protein | RCA23_RS09410 | Not Available | Negative | 1968790 - 1970103 | 45216.7 |
| hypothetical protein | RCA23_RS09415 | Not Available | Negative | 1970169 - 1970807 | 22812.9 |
| efflux rnd transporter periplasmic adaptor subunit | RCA23_RS09420 | Not Available | Positive | 1971036 - 1972271 | 43254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
