Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | RCA23_RS09325 | Not Available | Positive | 1952597 - 1953469 | 30674.6 |
| lysophospholipid acyltransferase family protein | RCA23_RS09330 | Not Available | Positive | 1953462 - 1954361 | 33855.3 |
| thioredoxin family protein | RCA23_RS09335 | Not Available | Negative | 1954409 - 1955107 | 26209.0 |
| aconitate hydratase acna | RCA23_RS09340 | Not Available | Positive | 1955293 - 1957980 | 96920.4 |
| dsbe family thiol:disulfide interchange protein | RCA23_RS09345 | Not Available | Negative | 1958161 - 1958697 | 19092.2 |
| heme exporter protein ccmd | RCA23_RS09350 | Not Available | Negative | 1958690 - 1958842 | 5353.55 |
| heme abc transporter permease ccmc | RCA23_RS09355 | Not Available | Negative | 1958839 - 1959609 | 28645.6 |
| heme exporter protein ccmb | RCA23_RS09360 | Not Available | Negative | 1959640 - 1960296 | 22412.4 |
| heme abc exporter atp-binding protein ccma | RCA23_RS09365 | Not Available | Negative | 1960293 - 1960907 | 21508.9 |
| mth938-like domain-containing protein | RCA23_RS09370 | Not Available | Negative | 1960911 - 1961264 | 12394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
