Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase ii | RCA23_RS09230 | Not Available | Negative | 1937545 - 1938804 | 43401.5 |
| acyl carrier protein | RCA23_RS09235 | Not Available | Negative | 1938947 - 1939180 | 8393.73 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | RCA23_RS09240 | Not Available | Negative | 1939399 - 1940136 | 25211.6 |
| acp s-malonyltransferase | RCA23_RS09245 | Not Available | Negative | 1940194 - 1941123 | 31764.2 |
| 30s ribosomal protein s6 | RCA23_RS09250 | Not Available | Positive | 1941409 - 1941774 | 13965.6 |
| 30s ribosomal protein s18 | RCA23_RS09255 | Not Available | Positive | 1941788 - 1942015 | 8694.84 |
| 50s ribosomal protein l9 | RCA23_RS09260 | Not Available | Positive | 1942028 - 1942645 | 21735.5 |
| trigger factor | RCA23_RS09265 | Not Available | Negative | 1942854 - 1944185 | 49142.1 |
| Trna-leu | Not Available | Not Available | Positive | 1944207 - 1944291 | Not Available |
| hypothetical protein | RCA23_RS16855 | Not Available | Positive | 1944369 - 1944497 | 4609.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
