Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose bisphosphate aldolase | RCA23_RS09180 | Not Available | Positive | 1927091 - 1927984 | 32037.3 |
| septum formation initiator family protein | RCA23_RS09185 | Not Available | Positive | 1928074 - 1928373 | 11147.5 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | RCA23_RS09190 | Not Available | Positive | 1928491 - 1929489 | 36345.1 |
| pyruvate dehydrogenase complex e1 component subunit beta | RCA23_RS09195 | Not Available | Positive | 1929493 - 1930863 | 48341.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | RCA23_RS09200 | Not Available | Positive | 1930874 - 1932154 | 44051.0 |
| serine o-acetyltransferase | RCA23_RS09205 | Not Available | Negative | 1932237 - 1933034 | 28615.6 |
| hypothetical protein | RCA23_RS09210 | Not Available | Negative | 1933132 - 1934226 | 39376.6 |
| yjbh domain-containing protein | RCA23_RS16770 | Not Available | Negative | 1934280 - 1934528 | 8754.44 |
| yjbh domain-containing protein | RCA23_RS09215 | Not Available | Negative | 1934639 - 1935882 | 47230.7 |
| endolytic transglycosylase mltg | RCA23_RS09225 | Not Available | Negative | 1936392 - 1937543 | 41734.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
