Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | RCA23_RS09025 | Not Available | Positive | 1897074 - 1898861 | 64231.8 |
| fumarylacetoacetate hydrolase family protein | RCA23_RS09030 | Not Available | Positive | 1898872 - 1899720 | 30028.8 |
| tfox/sxy family protein | RCA23_RS09035 | Not Available | Positive | 1899793 - 1900119 | 11744.2 |
| nucleoside-diphosphate kinase | RCA23_RS09040 | Not Available | Negative | 1900169 - 1900591 | 15060.9 |
| hypothetical protein | RCA23_RS09050 | Not Available | Positive | 1900753 - 1902597 | 66969.6 |
| abc-f family atp-binding cassette domain-containing protein | RCA23_RS09055 | Not Available | Positive | 1902629 - 1904470 | 67525.1 |
| marc family protein | RCA23_RS09060 | Not Available | Positive | 1904463 - 1905104 | 22465.4 |
| tigr02281 family clan aa aspartic protease | RCA23_RS09065 | Not Available | Positive | 1905138 - 1905722 | 20963.6 |
| dna polymerase iii subunit chi | RCA23_RS09070 | Not Available | Negative | 1905760 - 1906230 | 17243.3 |
| leucyl aminopeptidase | RCA23_RS09075 | Not Available | Negative | 1906223 - 1907713 | 52858.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
