Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | RCA23_RS08925 | Not Available | Negative | 1874071 - 1875030 | 34007.5 |
| hypothetical protein | RCA23_RS08930 | Not Available | Negative | 1875027 - 1875221 | 6754.53 |
| amidase | RCA23_RS08935 | Not Available | Negative | 1875236 - 1876573 | 47505.5 |
| trap transporter large permease subunit | RCA23_RS08940 | Not Available | Negative | 1876570 - 1877934 | 49795.9 |
| trap transporter small permease subunit | RCA23_RS08945 | Not Available | Negative | 1877964 - 1878578 | 23483.8 |
| trap transporter substrate-binding protein | RCA23_RS08950 | Not Available | Negative | 1878651 - 1879745 | 40307.6 |
| hypothetical protein | RCA23_RS08955 | Not Available | Negative | 1880388 - 1880759 | 13784.4 |
| glycerol kinase glpk | RCA23_RS08960 | Not Available | Negative | 1881539 - 1883014 | 53334.4 |
| rlme family rna methyltransferase | RCA23_RS08965 | Not Available | Negative | 1883087 - 1883797 | 25517.9 |
| ppx/gppa phosphatase family protein | RCA23_RS08970 | Not Available | Negative | 1883804 - 1884919 | 41197.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
