Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate oxidation carrier complex protein soxz | RCA23_RS08875 | Not Available | Negative | 1867276 - 1867605 | 12012.4 |
| thiosulfate oxidation carrier protein soxy | RCA23_RS08880 | Not Available | Negative | 1867631 - 1868053 | 13775.5 |
| sulfur oxidation c-type cytochrome soxx | RCA23_RS08885 | Not Available | Negative | 1868083 - 1868532 | 15994.1 |
| thioredoxin family protein | RCA23_RS08890 | Not Available | Negative | 1868649 - 1869170 | 19639.2 |
| cytochrome c biogenesis ccda family protein | RCA23_RS08895 | Not Available | Negative | 1869219 - 1869959 | 26629.5 |
| hypothetical protein | RCA23_RS08900 | Not Available | Positive | 1870030 - 1870389 | 13292.2 |
| arsr/smtb family transcription factor | RCA23_RS08905 | Not Available | Positive | 1870466 - 1870801 | 12377.1 |
| yeee/yede family protein | RCA23_RS08910 | Not Available | Positive | 1870811 - 1871866 | 36751.2 |
| yeee/yede thiosulfate transporter family protein | RCA23_RS08915 | Not Available | Positive | 1872083 - 1873135 | 35587.2 |
| nad(p)-binding domain-containing protein | RCA23_RS08920 | Not Available | Negative | 1873184 - 1874053 | 30244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
