Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component i | RCA23_RS08825 | Not Available | Positive | 1856545 - 1858056 | 54364.9 |
| mbl fold metallo-hydrolase | RCA23_RS08830 | Not Available | Positive | 1858187 - 1859110 | 32943.7 |
| mbl fold metallo-hydrolase | RCA23_RS08835 | Not Available | Positive | 1859114 - 1860058 | 34944.2 |
| 5-aminolevulinate synthase | RCA23_RS08840 | Not Available | Negative | 1860073 - 1861293 | 44030.6 |
| duf302 domain-containing protein | RCA23_RS08845 | Not Available | Negative | 1861295 - 1861744 | 16219.5 |
| hypothetical protein | RCA23_RS08850 | Not Available | Negative | 1861777 - 1862223 | 15807.4 |
| c-type cytochrome | RCA23_RS08855 | Not Available | Negative | 1862297 - 1863325 | 36540.8 |
| sulfite dehydrogenase | RCA23_RS08860 | Not Available | Negative | 1863309 - 1864577 | 46729.9 |
| thiosulfohydrolase soxb | RCA23_RS08865 | Not Available | Negative | 1864608 - 1866311 | 62546.0 |
| sulfur oxidation c-type cytochrome soxa | RCA23_RS08870 | Not Available | Negative | 1866412 - 1867248 | 30250.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
