Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical resistance protein arsh | RCA23_RS00850 | Not Available | Positive | 187650 - 188366 | 26759.3 |
| carbamoyl-phosphate synthase large subunit | RCA23_RS00855 | Not Available | Negative | 188422 - 191718 | 118475.0 |
| lrp/asnc family transcriptional regulator | RCA23_RS00860 | Not Available | Negative | 191858 - 192331 | 18014.5 |
| duf6356 family protein | RCA23_RS00865 | Not Available | Positive | 192434 - 192673 | 8985.95 |
| aspartate--trna ligase | RCA23_RS00870 | Not Available | Positive | 192769 - 194544 | 66896.2 |
| hypothetical protein | RCA23_RS15860 | Not Available | Negative | 194602 - 194868 | 9737.31 |
| response regulator | RCA23_RS15865 | Not Available | Negative | 195013 - 195297 | 10272.6 |
| methylmalonyl-coa epimerase | RCA23_RS00880 | Not Available | Positive | 195418 - 195822 | 14366.3 |
| duf1467 family protein | RCA23_RS00885 | Not Available | Positive | 195850 - 196143 | 10639.2 |
| ei24 domain-containing protein | RCA23_RS00890 | Not Available | Negative | 196100 - 196798 | 25702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
