Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | RCA23_RS08775 | Not Available | Positive | 1844553 - 1845488 | 33529.1 |
| protein adenylyltransferase selo | RCA23_RS08780 | Not Available | Positive | 1845488 - 1846876 | 49871.2 |
| cation:proton antiporter | RCA23_RS08785 | Not Available | Positive | 1846923 - 1848170 | 43952.4 |
| fur family transcriptional regulator | RCA23_RS08790 | Not Available | Positive | 1848204 - 1848626 | 16147.1 |
| dmt family transporter | RCA23_RS08795 | Not Available | Positive | 1848619 - 1849494 | 31149.1 |
| phosphopyruvate hydratase | RCA23_RS08800 | Not Available | Positive | 1849574 - 1850851 | 45290.7 |
| anhydro-n-acetylmuramic acid kinase | RCA23_RS08805 | Not Available | Negative | 1851050 - 1852135 | 38052.6 |
| tyrosine--trna ligase | RCA23_RS08810 | Not Available | Positive | 1852202 - 1853452 | 45910.0 |
| aminotransferase | RCA23_RS08815 | Not Available | Positive | 1853449 - 1854615 | 42787.4 |
| sura n-terminal domain-containing protein | RCA23_RS08820 | Not Available | Positive | 1854680 - 1856539 | 66884.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
