Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease subunit | RCA23_RS08720 | Not Available | Positive | 1832674 - 1833531 | 32561.9 |
| trap transporter large permease subunit | RCA23_RS08725 | Not Available | Positive | 1833543 - 1835897 | 82856.3 |
| arginyltransferase | RCA23_RS08730 | Not Available | Negative | 1835958 - 1836779 | 31214.2 |
| vitamin b12-dependent ribonucleotide reductase | RCA23_RS08735 | Not Available | Negative | 1836959 - 1840606 | 132415.0 |
| Trna-pro | Not Available | Not Available | Positive | 1841154 - 1841230 | Not Available |
| duf192 domain-containing protein | RCA23_RS08750 | Not Available | Negative | 1841278 - 1841748 | 17007.6 |
| cold-shock protein | RCA23_RS08755 | Not Available | Negative | 1841745 - 1842275 | 19018.8 |
| pyridoxamine 5'-phosphate oxidase | RCA23_RS08760 | Not Available | Negative | 1842491 - 1843096 | 22820.8 |
| enoyl-acp reductase fabi | RCA23_RS08765 | Not Available | Positive | 1843179 - 1843967 | 28032.9 |
| xanthine phosphoribosyltransferase | RCA23_RS08770 | Not Available | Positive | 1844001 - 1844504 | 18819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
