Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2852 domain-containing protein | RCA23_RS08680 | Not Available | Positive | 1824858 - 1825280 | 16220.0 |
| hypothetical protein | RCA23_RS16520 | Not Available | Positive | 1825339 - 1825503 | 6048.47 |
| rdd family protein | RCA23_RS16000 | Not Available | Positive | 1825507 - 1825782 | 10069.6 |
| hypothetical protein | RCA23_RS08690 | Not Available | Negative | 1825840 - 1826061 | 8135.64 |
| srpbcc family protein | RCA23_RS08695 | Not Available | Negative | 1826054 - 1827205 | 42999.3 |
| acetolactate synthase small subunit | RCA23_RS08700 | Not Available | Negative | 1827375 - 1827932 | 19942.9 |
| acetolactate synthase 3 large subunit | RCA23_RS08705 | Not Available | Negative | 1827944 - 1829695 | 63257.1 |
| hypothetical protein | RCA23_RS16525 | Not Available | Positive | 1829937 - 1830311 | 14097.0 |
| hypothetical protein | RCA23_RS16530 | Not Available | Positive | 1830406 - 1831023 | 23054.2 |
| twin-arginine translocation signal domain-containing protein | RCA23_RS08715 | Not Available | Positive | 1831460 - 1832551 | 38715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
