Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein a | RCA23_RS08585 | Not Available | Negative | 1805739 - 1806524 | 29789.1 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | RCA23_RS08590 | Not Available | Negative | 1806524 - 1807519 | 36477.8 |
| spor domain-containing protein | RCA23_RS08595 | Not Available | Negative | 1807533 - 1808420 | 30540.3 |
| arginine--trna ligase | RCA23_RS08600 | Not Available | Negative | 1808491 - 1810236 | 63648.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | RCA23_RS08605 | Not Available | Negative | 1810285 - 1811427 | 42575.1 |
| iron-sulfur cluster assembly accessory protein | RCA23_RS08610 | Not Available | Positive | 1811504 - 1811830 | 11233.3 |
| exodeoxyribonuclease iii | RCA23_RS08615 | Not Available | Positive | 1811885 - 1812664 | 29088.4 |
| cytochrome b/b6 domain-containing protein | RCA23_RS08620 | Not Available | Negative | 1812685 - 1813218 | 19494.9 |
| rna polymerase-binding protein dksa | RCA23_RS08625 | Not Available | Negative | 1813333 - 1813755 | 16512.2 |
| aaa family atpase | RCA23_RS08630 | Not Available | Positive | 1813911 - 1814750 | 31799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
