Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yced family protein | RCA23_RS08545 | Not Available | Positive | 1799448 - 1800038 | 21575.8 |
| 50s ribosomal protein l32 | RCA23_RS16260 | Not Available | Positive | 1800247 - 1800453 | 7535.79 |
| phosphate acyltransferase plsx | RCA23_RS08550 | Not Available | Positive | 1800483 - 1801568 | 38008.5 |
| beta-ketoacyl-acp synthase iii | RCA23_RS08555 | Not Available | Positive | 1801571 - 1802533 | 34185.8 |
| integration host factor subunit alpha | RCA23_RS08560 | Not Available | Positive | 1802614 - 1802916 | 10912.1 |
| merr family transcriptional regulator | RCA23_RS15995 | Not Available | Positive | 1802922 - 1803605 | 24781.8 |
| Trna-pro | Not Available | Not Available | Positive | 1803668 - 1803744 | Not Available |
| 2'-deoxycytidine 5'-triphosphate deaminase | RCA23_RS08575 | Not Available | Positive | 1803802 - 1804875 | 39147.9 |
| hypothetical protein | RCA23_RS16510 | Not Available | Negative | 1804909 - 1805094 | 7167.9 |
| smc-scp complex subunit scpb | RCA23_RS08580 | Not Available | Negative | 1805078 - 1805746 | 24739.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
