Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | RCA23_RS08445 | Not Available | Negative | 1778613 - 1780202 | 57796.0 |
| 6-phosphogluconolactonase | RCA23_RS08450 | Not Available | Negative | 1780212 - 1780889 | 23586.4 |
| glucose-6-phosphate dehydrogenase | RCA23_RS08455 | Not Available | Negative | 1780889 - 1782340 | 53907.6 |
| radical sam protein | RCA23_RS08460 | Not Available | Positive | 1782518 - 1783450 | 34037.8 |
| hnh endonuclease | RCA23_RS08465 | Not Available | Negative | 1783447 - 1784031 | 22319.6 |
| alpha/beta hydrolase | RCA23_RS08470 | Not Available | Negative | 1784112 - 1784786 | 23883.7 |
| dna-3-methyladenine glycosylase | RCA23_RS08475 | Not Available | Negative | 1784783 - 1785448 | 23642.7 |
| cobalt-precorrin-6a reductase | RCA23_RS08480 | Not Available | Negative | 1785397 - 1786128 | 26482.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | RCA23_RS08485 | Not Available | Negative | 1786125 - 1787168 | 36416.1 |
| uroporphyrinogen-iii c-methyltransferase | RCA23_RS08490 | Not Available | Positive | 1787265 - 1788116 | 29893.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
