Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase | RCA23_RS00800 | Not Available | Negative | 174031 - 175347 | 46609.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | RCA23_RS00805 | Not Available | Positive | 175575 - 177014 | 53965.4 |
| sulfoacetaldehyde acetyltransferase | RCA23_RS00810 | Not Available | Positive | 177159 - 178928 | 63675.1 |
| phosphate acetyltransferase | RCA23_RS00815 | Not Available | Positive | 178940 - 179944 | 34063.0 |
| molybdopterin oxidoreductase family protein | RCA23_RS00820 | Not Available | Positive | 179971 - 182781 | 103740.0 |
| alpha/beta fold hydrolase | RCA23_RS00825 | Not Available | Positive | 182778 - 183659 | 31170.0 |
| 4fe-4s dicluster domain-containing protein | RCA23_RS00830 | Not Available | Positive | 183656 - 184402 | 26671.8 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | RCA23_RS00835 | Not Available | Positive | 184402 - 185274 | 31117.7 |
| alanine/glycine:cation symporter family protein | RCA23_RS00840 | Not Available | Negative | 185380 - 186741 | 47461.9 |
| thymidine kinase | RCA23_RS00845 | Not Available | Negative | 186917 - 187519 | 22039.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
