Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1749330 - 1749403 | Not Available |
| cysteine desulfurase | RCA23_RS08300 | Not Available | Negative | 1749451 - 1750674 | 44101.0 |
| hypothetical protein | RCA23_RS08305 | Not Available | Negative | 1750671 - 1751249 | 20212.8 |
| hypothetical protein | RCA23_RS08310 | Not Available | Negative | 1751246 - 1751722 | 17281.7 |
| fe-s cluster assembly protein sufd | RCA23_RS08315 | Not Available | Negative | 1751728 - 1752993 | 45186.1 |
| fe-s cluster assembly atpase sufc | RCA23_RS08320 | Not Available | Negative | 1752993 - 1753748 | 27474.4 |
| fe-s cluster assembly protein sufb | RCA23_RS08325 | Not Available | Negative | 1753810 - 1755321 | 56227.5 |
| cysteine desulfurase family protein | RCA23_RS08330 | Not Available | Negative | 1755327 - 1756373 | 36044.2 |
| rrf2 family transcriptional regulator | RCA23_RS08335 | Not Available | Negative | 1756373 - 1756831 | 16395.7 |
| alpha/beta hydrolase | RCA23_RS08340 | Not Available | Positive | 1757012 - 1757665 | 24164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
