Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6477 family protein | RCA23_RS08000 | Not Available | Negative | 1683432 - 1683713 | 10800.3 |
| duf6456 domain-containing protein | RCA23_RS08005 | Not Available | Positive | 1683970 - 1684989 | 37602.2 |
| lipoyl synthase | RCA23_RS08010 | Not Available | Positive | 1685077 - 1686024 | 35134.2 |
| hypothetical protein | RCA23_RS08015 | Not Available | Negative | 1686039 - 1686218 | 6740.55 |
| hypoxanthine phosphoribosyltransferase | RCA23_RS08020 | Not Available | Negative | 1686215 - 1686751 | 20370.7 |
| type ii toxin-antitoxin system rata family toxin | RCA23_RS08025 | Not Available | Positive | 1686817 - 1687272 | 17165.6 |
| ammonium transporter | RCA23_RS08030 | Not Available | Negative | 1687319 - 1688506 | 41116.6 |
| cina family protein | RCA23_RS08035 | Not Available | Negative | 1688647 - 1689126 | 16511.7 |
| phosphatidylglycerophosphatase a | RCA23_RS08040 | Not Available | Negative | 1689123 - 1689584 | 16192.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | RCA23_RS08045 | Not Available | Negative | 1689581 - 1690723 | 40416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
