Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whg domain-containing protein | RCA23_RS07950 | Not Available | Negative | 1674470 - 1675084 | 22212.7 |
| homoserine o-succinyltransferase | RCA23_RS07955 | Not Available | Negative | 1675137 - 1676054 | 34651.3 |
| hypothetical protein | RCA23_RS07960 | Not Available | Negative | 1676060 - 1676950 | 33476.5 |
| dmt family transporter | RCA23_RS07965 | Not Available | Negative | 1677015 - 1677863 | 30304.4 |
| h-ns family nucleoid-associated regulatory protein | RCA23_RS07970 | Not Available | Negative | 1677997 - 1678182 | 6963.59 |
| gnat family n-acetyltransferase | RCA23_RS07975 | Not Available | Negative | 1678410 - 1679129 | 27345.2 |
| yjbh domain-containing protein | RCA23_RS16505 | Not Available | Positive | 1679315 - 1679446 | 5153.11 |
| duf6552 family protein | RCA23_RS07985 | Not Available | Negative | 1679807 - 1680034 | 8487.9 |
| glutamine-hydrolyzing gmp synthase | RCA23_RS07990 | Not Available | Negative | 1680161 - 1681717 | 57294.6 |
| trimethylamine methyltransferase family protein | RCA23_RS07995 | Not Available | Positive | 1681872 - 1683413 | 56061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
