Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RCA23_RS07900 | Not Available | Positive | 1663915 - 1664619 | 25308.8 |
| energy-coupling factor abc transporter atp-binding protein | RCA23_RS07905 | Not Available | Positive | 1664613 - 1665329 | 25508.1 |
| substrate-binding domain-containing protein | RCA23_RS07910 | Not Available | Positive | 1665326 - 1666123 | 28004.0 |
| vtt domain-containing protein | RCA23_RS07915 | Not Available | Positive | 1666133 - 1666561 | 15686.5 |
| dmt family transporter | RCA23_RS07920 | Not Available | Positive | 1666582 - 1667487 | 31844.5 |
| ntp transferase domain-containing protein | RCA23_RS07925 | Not Available | Negative | 1667497 - 1668078 | 21409.9 |
| fad-dependent oxidoreductase | RCA23_RS07930 | Not Available | Negative | 1668111 - 1670501 | 87566.4 |
| fad-dependent oxidoreductase | RCA23_RS07935 | Not Available | Positive | 1670735 - 1673146 | 88818.6 |
| sdr family oxidoreductase | RCA23_RS07940 | Not Available | Negative | 1673149 - 1673907 | 27216.4 |
| mapeg family protein | RCA23_RS07945 | Not Available | Positive | 1674074 - 1674460 | 14209.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
