Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec/rec2 family competence protein | RCA23_RS07605 | Not Available | Positive | 1603619 - 1605670 | 72920.0 |
| transcriptional repressor lexa | RCA23_RS07610 | Not Available | Negative | 1605667 - 1606359 | 25483.8 |
| gephyrin-like molybdotransferase glp | RCA23_RS07615 | Not Available | Negative | 1606449 - 1607624 | 41060.6 |
| cyclic pyranopterin monophosphate synthase moac | RCA23_RS07620 | Not Available | Negative | 1607621 - 1608103 | 16962.7 |
| indole-3-glycerol phosphate synthase trpc | RCA23_RS07625 | Not Available | Negative | 1608104 - 1608916 | 28730.2 |
| anthranilate phosphoribosyltransferase | RCA23_RS07630 | Not Available | Negative | 1608933 - 1609952 | 34321.1 |
| anthranilate synthase component ii | RCA23_RS07635 | Not Available | Negative | 1609949 - 1610530 | 20782.3 |
| hypothetical protein | RCA23_RS07640 | Not Available | Positive | 1610679 - 1611788 | 39374.8 |
| stealth cr1 domain-containing protein | RCA23_RS07645 | Not Available | Negative | 1611811 - 1612782 | 36517.6 |
| Trna-arg | Not Available | Not Available | Positive | 1612876 - 1612952 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
