Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16495 | Not Available | Negative | 1581945 - 1582088 | 5144.43 |
| type i glyceraldehyde-3-phosphate dehydrogenase | RCA23_RS07510 | Not Available | Negative | 1582103 - 1583104 | 35338.2 |
| transketolase | RCA23_RS07515 | Not Available | Negative | 1583296 - 1585311 | 71746.6 |
| hypothetical protein | RCA23_RS15975 | Not Available | Positive | 1585511 - 1585894 | 13210.5 |
| cell division protein zapa | RCA23_RS07525 | Not Available | Positive | 1585887 - 1586291 | 14063.0 |
| grx4 family monothiol glutaredoxin | RCA23_RS07530 | Not Available | Negative | 1586354 - 1586719 | 13245.5 |
| hypothetical protein | RCA23_RS16850 | Not Available | Positive | 1586796 - 1586921 | 4173.05 |
| bola/ibag family iron-sulfur metabolism protein | RCA23_RS07540 | Not Available | Negative | 1586971 - 1587213 | 8464.98 |
| phosphoribosylformylglycinamidine synthase subunit purl | RCA23_RS07545 | Not Available | Negative | 1587267 - 1589426 | 75777.9 |
| lysr family transcriptional regulator | RCA23_RS07550 | Not Available | Negative | 1589726 - 1590634 | 34235.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
