Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | RCA23_RS07455 | Not Available | Positive | 1568611 - 1570005 | 49332.7 |
| excinuclease abc subunit uvra | RCA23_RS07465 | Not Available | Positive | 1570403 - 1573255 | 105440.0 |
| mmge/prpd family protein | RCA23_RS07470 | Not Available | Negative | 1573252 - 1574577 | 47468.9 |
| 3-hydroxyisobutyrate dehydrogenase | RCA23_RS07475 | Not Available | Negative | 1574587 - 1575459 | 29484.2 |
| enoyl-coa hydratase/isomerase family protein | RCA23_RS07480 | Not Available | Negative | 1575461 - 1576498 | 37418.9 |
| acyl-coa dehydrogenase family protein | RCA23_RS07485 | Not Available | Negative | 1576495 - 1577631 | 40870.9 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | RCA23_RS07490 | Not Available | Negative | 1577765 - 1579264 | 53609.2 |
| lysr family transcriptional regulator | RCA23_RS07495 | Not Available | Positive | 1579359 - 1580273 | 33524.7 |
| pantetheine-phosphate adenylyltransferase | RCA23_RS07500 | Not Available | Positive | 1580359 - 1580856 | 18431.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | RCA23_RS07505 | Not Available | Negative | 1580877 - 1581878 | 35475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
