Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16845 | Not Available | Negative | 1557520 - 1557645 | 4529.3 |
| peptide chain release factor 2 | RCA23_RS07410 | Not Available | Positive | 1557611 - 1558735 | 41348.3 |
| polymer-forming cytoskeletal protein | RCA23_RS07415 | Not Available | Negative | 1558798 - 1559286 | 16701.9 |
| m23 family metallopeptidase | RCA23_RS07420 | Not Available | Negative | 1559276 - 1560598 | 49457.8 |
| ferritin-like domain-containing protein | RCA23_RS07425 | Not Available | Negative | 1560740 - 1561570 | 30680.7 |
| thioredoxin-dependent thiol peroxidase | RCA23_RS07430 | Not Available | Negative | 1561567 - 1562061 | 18320.9 |
| asma-like c-terminal region-containing protein | RCA23_RS07435 | Not Available | Positive | 1562118 - 1565399 | 117459.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | RCA23_RS07440 | Not Available | Positive | 1565470 - 1566519 | 37801.4 |
| mfs transporter | RCA23_RS07445 | Not Available | Positive | 1566591 - 1567847 | 44489.0 |
| duf924 family protein | RCA23_RS07450 | Not Available | Positive | 1567922 - 1568500 | 22029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
