Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | RCA23_RS07210 | Not Available | Positive | 1516647 - 1517570 | 32798.8 |
| Trna-ser | Not Available | Not Available | Positive | 1517614 - 1517703 | Not Available |
| polymer-forming cytoskeletal protein | RCA23_RS16255 | Not Available | Positive | 1518062 - 1518574 | 18102.4 |
| zinc metalloprotease htpx | RCA23_RS07220 | Not Available | Negative | 1518554 - 1519456 | 32749.6 |
| hypothetical protein | RCA23_RS07225 | Not Available | Negative | 1519945 - 1520172 | 8015.43 |
| histone deacetylase | RCA23_RS07230 | Not Available | Negative | 1520490 - 1521395 | 33793.2 |
| recombinase family protein | RCA23_RS07240 | Not Available | Positive | 1522156 - 1522710 | 20231.7 |
| hypothetical protein | RCA23_RS16490 | Not Available | Negative | 1522733 - 1522873 | 5384.53 |
| cia30 family protein | RCA23_RS07245 | Not Available | Positive | 1523534 - 1524067 | 19547.4 |
| hypothetical protein | RCA23_RS07260 | Not Available | Positive | 1525090 - 1525479 | 14189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
