Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | RCA23_RS07160 | Not Available | Positive | 1508309 - 1509337 | 37210.2 |
| succinate dehydrogenase, cytochrome b556 subunit | RCA23_RS07165 | Not Available | Positive | 1509515 - 1509898 | 14277.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | RCA23_RS07170 | Not Available | Positive | 1509911 - 1510282 | 13290.7 |
| succinate dehydrogenase flavoprotein subunit | RCA23_RS07175 | Not Available | Positive | 1510301 - 1512106 | 64895.9 |
| hypothetical protein | RCA23_RS07180 | Not Available | Positive | 1512106 - 1512408 | 10248.6 |
| succinate dehydrogenase iron-sulfur subunit | RCA23_RS07185 | Not Available | Positive | 1512506 - 1513285 | 29634.1 |
| purine-nucleoside phosphorylase | RCA23_RS07190 | Not Available | Negative | 1513368 - 1514072 | 25305.4 |
| gnat family n-acetyltransferase | RCA23_RS07195 | Not Available | Negative | 1514077 - 1514517 | 16685.6 |
| tryptophan synthase subunit alpha | RCA23_RS07200 | Not Available | Negative | 1514536 - 1515327 | 27532.1 |
| redox-regulated atpase ychf | RCA23_RS07205 | Not Available | Positive | 1515506 - 1516603 | 39243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
