Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | RCA23_RS07105 | Not Available | Negative | 1499505 - 1500548 | 37319.5 |
| replicative dna helicase | RCA23_RS07110 | Not Available | Negative | 1500630 - 1502120 | 54663.0 |
| orotate phosphoribosyltransferase | RCA23_RS07115 | Not Available | Negative | 1502354 - 1503031 | 25137.2 |
| dihydroorotase | RCA23_RS07120 | Not Available | Negative | 1503058 - 1504098 | 36937.0 |
| hypothetical protein | RCA23_RS07125 | Not Available | Positive | 1504207 - 1504548 | 12299.4 |
| hypothetical protein | RCA23_RS07130 | Not Available | Positive | 1504659 - 1504880 | 8253.01 |
| hypothetical protein | RCA23_RS07135 | Not Available | Negative | 1504914 - 1505732 | 30978.8 |
| malate dehydrogenase | RCA23_RS07140 | Not Available | Negative | 1506076 - 1507038 | 33647.1 |
| aldolase/citrate lyase family protein | RCA23_RS07150 | Not Available | Positive | 1507240 - 1508112 | 30937.4 |
| duf1737 domain-containing protein | RCA23_RS07155 | Not Available | Positive | 1508109 - 1508312 | 7474.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
