Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | RCA23_RS07055 | Not Available | Positive | 1490074 - 1490913 | 30918.0 |
| peptidoglycan dd-metalloendopeptidase family protein | RCA23_RS07060 | Not Available | Negative | 1490932 - 1492065 | 39540.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | RCA23_RS07065 | Not Available | Negative | 1492104 - 1492751 | 23582.5 |
| 5'/3'-nucleotidase sure | RCA23_RS07070 | Not Available | Negative | 1492755 - 1493537 | 27188.2 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS07075 | Not Available | Negative | 1493628 - 1494281 | 22948.5 |
| amidophosphoribosyltransferase | RCA23_RS07080 | Not Available | Negative | 1494328 - 1495776 | 52687.9 |
| cvpa family protein | RCA23_RS07085 | Not Available | Negative | 1495963 - 1496517 | 19973.6 |
| dna repair protein rada | RCA23_RS07090 | Not Available | Negative | 1496541 - 1497899 | 47873.9 |
| abc transporter atp-binding protein | RCA23_RS07095 | Not Available | Negative | 1497977 - 1498723 | 27188.0 |
| abc transporter permease | RCA23_RS07100 | Not Available | Negative | 1498720 - 1499496 | 26880.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
