Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuoh | RCA23_RS06955 | Not Available | Positive | 1468823 - 1469860 | 38207.7 |
| nadh-quinone oxidoreductase subunit nuoi | RCA23_RS06960 | Not Available | Positive | 1469865 - 1470359 | 19202.8 |
| nadh-quinone oxidoreductase subunit j | RCA23_RS06965 | Not Available | Positive | 1470382 - 1470987 | 21785.7 |
| nadh-quinone oxidoreductase subunit nuok | RCA23_RS06970 | Not Available | Positive | 1470984 - 1471289 | 10958.9 |
| nadh-quinone oxidoreductase subunit l | RCA23_RS06975 | Not Available | Positive | 1471296 - 1473413 | 77381.8 |
| nadh-quinone oxidoreductase subunit m | RCA23_RS06980 | Not Available | Positive | 1473413 - 1474963 | 56158.2 |
| nadh-quinone oxidoreductase subunit nuon | RCA23_RS06985 | Not Available | Positive | 1474980 - 1476422 | 51164.0 |
| biotin--[acetyl-coa-carboxylase] ligase | RCA23_RS06990 | Not Available | Positive | 1476412 - 1477155 | 25688.8 |
| type iii pantothenate kinase | RCA23_RS06995 | Not Available | Positive | 1477167 - 1477937 | 27709.2 |
| ribonuclease j | RCA23_RS07000 | Not Available | Positive | 1477937 - 1479601 | 59769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
