Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yodc family protein | RCA23_RS06905 | Not Available | Positive | 1460682 - 1460888 | 7335.95 |
| nadh-quinone oxidoreductase subunit c | RCA23_RS06910 | Not Available | Positive | 1460885 - 1461496 | 23355.7 |
| hypothetical protein | RCA23_RS06915 | Not Available | Positive | 1461500 - 1462396 | 34305.5 |
| nadh-quinone oxidoreductase subunit d | RCA23_RS06920 | Not Available | Positive | 1462446 - 1463657 | 45761.1 |
| yjbh domain-containing protein | RCA23_RS06925 | Not Available | Positive | 1463723 - 1464469 | 27001.4 |
| duf5337 domain-containing protein | RCA23_RS06930 | Not Available | Positive | 1464577 - 1464804 | 8482.59 |
| nadh-quinone oxidoreductase subunit nuof | RCA23_RS06935 | Not Available | Positive | 1464810 - 1466105 | 47331.9 |
| duf5333 domain-containing protein | RCA23_RS06940 | Not Available | Positive | 1466109 - 1466543 | 15374.8 |
| nadh-quinone oxidoreductase subunit nuog | RCA23_RS06945 | Not Available | Positive | 1466546 - 1468564 | 72094.5 |
| hypothetical protein | RCA23_RS06950 | Not Available | Positive | 1468569 - 1468826 | 9054.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
