Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | RCA23_RS06855 | Not Available | Positive | 1451052 - 1452245 | 42991.9 |
| isovaleryl-coa dehydrogenase | RCA23_RS06860 | Not Available | Positive | 1452356 - 1453519 | 41850.3 |
| hypothetical protein | RCA23_RS06865 | Not Available | Positive | 1453516 - 1454001 | 17244.7 |
| carboxyl transferase domain-containing protein | RCA23_RS06870 | Not Available | Positive | 1454023 - 1455594 | 55224.2 |
| hypothetical protein | RCA23_RS06875 | Not Available | Positive | 1455599 - 1456069 | 17368.2 |
| biotin carboxylase n-terminal domain-containing protein | RCA23_RS06880 | Not Available | Positive | 1456066 - 1457997 | 68816.4 |
| hydroxymethylglutaryl-coa lyase | RCA23_RS06885 | Not Available | Positive | 1457997 - 1458887 | 30727.7 |
| crotonase/enoyl-coa hydratase family protein | RCA23_RS06890 | Not Available | Positive | 1458877 - 1459662 | 27772.4 |
| nadh-quinone oxidoreductase subunit a | RCA23_RS06895 | Not Available | Positive | 1459788 - 1460153 | 13682.0 |
| nadh-quinone oxidoreductase subunit b family protein | RCA23_RS06900 | Not Available | Positive | 1460144 - 1460677 | 19533.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
