Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is481 family transposase | RCA23_RS06660 | Not Available | Positive | 1410794 - 1411873 | 41040.2 |
| hypothetical protein | RCA23_RS06665 | Not Available | Negative | 1411980 - 1413278 | 49051.2 |
| tyrosine-type recombinase/integrase | RCA23_RS06670 | Not Available | Negative | 1413294 - 1414571 | 48622.9 |
| Trna-leu | Not Available | Not Available | Positive | 1414676 - 1414759 | Not Available |
| tyrosine-type recombinase/integrase | RCA23_RS06680 | Not Available | Positive | 1414837 - 1415982 | 42669.6 |
| hypothetical protein | RCA23_RS16480 | Not Available | Negative | 1416702 - 1416887 | 6771.15 |
| gyd domain-containing protein | RCA23_RS06685 | Not Available | Negative | 1417237 - 1417647 | 14607.7 |
| hypothetical protein | RCA23_RS06690 | Not Available | Positive | 1417930 - 1418304 | 13249.7 |
| hypothetical protein | RCA23_RS06695 | Not Available | Negative | 1418572 - 1418856 | 10173.2 |
| hypothetical protein | RCA23_RS06700 | Not Available | Positive | 1419178 - 1420584 | 52535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
