Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | RCA23_RS06570 | Not Available | Positive | 1391480 - 1392226 | 27618.4 |
| cox15/ctaa family protein | RCA23_RS06575 | Not Available | Positive | 1392274 - 1393416 | 41888.6 |
| carboxypeptidase m32 | RCA23_RS06580 | Not Available | Positive | 1393413 - 1394894 | 54210.6 |
| dna gyrase subunit a | RCA23_RS06585 | Not Available | Negative | 1395344 - 1398094 | 101142.0 |
| disulfide bond formation protein b | RCA23_RS06590 | Not Available | Negative | 1398543 - 1399028 | 17125.0 |
| yqaa family protein | RCA23_RS06595 | Not Available | Negative | 1399025 - 1399603 | 20983.3 |
| hypothetical protein | RCA23_RS06600 | Not Available | Negative | 1399839 - 1400438 | 21796.1 |
| nuclear transport factor 2 family protein | RCA23_RS06605 | Not Available | Negative | 1401337 - 1401711 | 13484.8 |
| duf1330 domain-containing protein | RCA23_RS06610 | Not Available | Positive | 1402164 - 1402454 | 10498.6 |
| duf3303 domain-containing protein | RCA23_RS06615 | Not Available | Positive | 1402883 - 1403188 | 11291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
