Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | RCA23_RS06525 | Not Available | Positive | 1383727 - 1384263 | 19577.4 |
| gnat family n-acetyltransferase | RCA23_RS06530 | Not Available | Positive | 1384267 - 1384815 | 20138.4 |
| gtpase obge | RCA23_RS06535 | Not Available | Positive | 1384812 - 1385840 | 36374.1 |
| glutamate 5-kinase | RCA23_RS06540 | Not Available | Positive | 1385828 - 1386934 | 38708.5 |
| glutamate-5-semialdehyde dehydrogenase | RCA23_RS06545 | Not Available | Positive | 1386953 - 1388206 | 44404.4 |
| histidine phosphotransferase family protein | RCA23_RS06550 | Not Available | Negative | 1388243 - 1388824 | 20926.8 |
| duf3553 domain-containing protein | RCA23_RS16245 | Not Available | Positive | 1388850 - 1389026 | 6487.77 |
| gnat family n-acetyltransferase | RCA23_RS06555 | Not Available | Positive | 1389099 - 1389872 | 27561.3 |
| lysophospholipid acyltransferase family protein | RCA23_RS06560 | Not Available | Positive | 1389890 - 1390708 | 30619.0 |
| thiamine phosphate synthase | RCA23_RS06565 | Not Available | Negative | 1390754 - 1391377 | 22410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
