Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eh signature domain-containing protein | RCA23_RS06435 | Not Available | Positive | 1365416 - 1367443 | 77916.2 |
| dead/deah box helicase | RCA23_RS06440 | Not Available | Positive | 1367457 - 1370579 | 116388.0 |
| hypothetical protein | RCA23_RS06445 | Not Available | Negative | 1370973 - 1371410 | 16971.5 |
| hypothetical protein | RCA23_RS06450 | Not Available | Negative | 1371616 - 1372098 | 18981.8 |
| hypothetical protein | RCA23_RS06455 | Not Available | Negative | 1372277 - 1372594 | 11987.7 |
| hypothetical protein | RCA23_RS16460 | Not Available | Positive | 1372881 - 1373252 | 13378.0 |
| hypothetical protein | RCA23_RS06460 | Not Available | Positive | 1373306 - 1374205 | 33532.1 |
| hypothetical protein | RCA23_RS16465 | Not Available | Positive | 1374660 - 1374866 | 7943.33 |
| hypothetical protein | RCA23_RS06465 | Not Available | Positive | 1374971 - 1375435 | 17541.7 |
| integrase core domain-containing protein | RCA23_RS06470 | Not Available | Positive | 1375674 - 1376117 | 17037.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
