Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase domain-containing protein | RCA23_RS06375 | Not Available | Negative | 1347575 - 1349548 | 73392.6 |
| alpha-2-macroglobulin family protein | RCA23_RS06380 | Not Available | Negative | 1349545 - 1354560 | 184593.0 |
| hypothetical protein | RCA23_RS06390 | Not Available | Positive | 1355322 - 1355774 | 16681.2 |
| dead/deah box helicase | RCA23_RS06395 | Not Available | Negative | 1355828 - 1357492 | 60861.3 |
| hypothetical protein | RCA23_RS16455 | Not Available | Negative | 1357498 - 1357698 | 7568.03 |
| protein kinase domain-containing protein | RCA23_RS06405 | Not Available | Positive | 1358097 - 1359374 | 49643.2 |
| pp2c family protein-serine/threonine phosphatase | RCA23_RS06410 | Not Available | Positive | 1359362 - 1360081 | 25920.1 |
| uvrd-helicase domain-containing protein | RCA23_RS06415 | Not Available | Negative | 1360134 - 1362272 | 80438.6 |
| hypothetical protein | RCA23_RS06420 | Not Available | Positive | 1362250 - 1364124 | 68173.5 |
| flagellar motor protein motb | RCA23_RS15965 | Not Available | Positive | 1364121 - 1365416 | 49308.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
