Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | RCA23_RS06320 | Not Available | Negative | 1338905 - 1340710 | 68764.8 |
| hypothetical protein | RCA23_RS06325 | Not Available | Positive | 1340970 - 1341416 | 17862.2 |
| site-specific integrase | RCA23_RS06330 | Not Available | Positive | 1341557 - 1342156 | 22164.9 |
| hypothetical protein | RCA23_RS06335 | Not Available | Negative | 1342181 - 1342597 | 16336.1 |
| hypothetical protein | RCA23_RS06340 | Not Available | Negative | 1342702 - 1343211 | 19462.6 |
| hypothetical protein | RCA23_RS06345 | Not Available | Positive | 1343328 - 1344026 | 27393.1 |
| hypothetical protein | RCA23_RS06350 | Not Available | Negative | 1344037 - 1344489 | 17804.9 |
| hypothetical protein | RCA23_RS06360 | Not Available | Positive | 1345435 - 1345638 | 7145.71 |
| hnh endonuclease family protein | RCA23_RS06365 | Not Available | Negative | 1345639 - 1346190 | 21342.3 |
| exonuclease domain-containing protein | RCA23_RS06370 | Not Available | Negative | 1346172 - 1347575 | 53597.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
