Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | RCA23_RS06205 | Not Available | Positive | 1313694 - 1314857 | 42094.1 |
| sugar abc transporter atp-binding protein | RCA23_RS06210 | Not Available | Positive | 1314857 - 1316431 | 55310.1 |
| abc transporter permease | RCA23_RS06215 | Not Available | Positive | 1316418 - 1317386 | 33251.5 |
| putative quinol monooxygenase | RCA23_RS06220 | Not Available | Positive | 1317389 - 1317691 | 11601.0 |
| sugar phosphate isomerase/epimerase family protein | RCA23_RS06225 | Not Available | Positive | 1317805 - 1318863 | 39769.7 |
| gfo/idh/moca family protein | RCA23_RS06230 | Not Available | Positive | 1318867 - 1320018 | 41451.5 |
| yjbh domain-containing protein | RCA23_RS16765 | Not Available | Positive | 1320371 - 1320457 | 3421.99 |
| amidohydrolase | RCA23_RS06235 | Not Available | Positive | 1320689 - 1321837 | 40787.6 |
| m24 family metallopeptidase | RCA23_RS06240 | Not Available | Positive | 1321840 - 1322985 | 41800.2 |
| hypothetical protein | RCA23_RS06250 | Not Available | Negative | 1323853 - 1324296 | 15901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
