Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | RCA23_RS06155 | Not Available | Negative | 1300768 - 1301568 | 29103.6 |
| amp-binding protein | RCA23_RS06160 | Not Available | Negative | 1301586 - 1303130 | 55681.5 |
| (2fe-2s)-binding protein | RCA23_RS06165 | Not Available | Negative | 1303123 - 1303632 | 18181.1 |
| fad binding domain-containing protein | RCA23_RS06170 | Not Available | Negative | 1303620 - 1304444 | 29457.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RCA23_RS06175 | Not Available | Negative | 1304441 - 1307380 | 103885.0 |
| arac family transcriptional regulator | RCA23_RS06180 | Not Available | Negative | 1307487 - 1308359 | 32272.9 |
| substrate-binding domain-containing protein | RCA23_RS06185 | Not Available | Negative | 1309085 - 1310095 | 35933.3 |
| rok family protein | RCA23_RS06190 | Not Available | Negative | 1310106 - 1311473 | 48615.7 |
| sugar phosphate isomerase/epimerase family protein | RCA23_RS06195 | Not Available | Positive | 1311642 - 1312454 | 29551.4 |
| substrate-binding domain-containing protein | RCA23_RS06200 | Not Available | Positive | 1312504 - 1313622 | 38724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
