Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS06095 | Not Available | Positive | 1291162 - 1291350 | 7365.01 |
| hypothetical protein | RCA23_RS06100 | Not Available | Positive | 1291427 - 1292068 | 23746.4 |
| aaa family atpase | RCA23_RS15960 | Not Available | Positive | 1292068 - 1293384 | 48316.2 |
| hypothetical protein | RCA23_RS06110 | Not Available | Negative | 1293531 - 1294040 | 19425.2 |
| ef-hand domain-containing protein | RCA23_RS06115 | Not Available | Negative | 1294163 - 1294894 | 24649.5 |
| abc transporter atp-binding protein | RCA23_RS06130 | Not Available | Negative | 1296210 - 1296908 | 25197.6 |
| abc transporter atp-binding protein | RCA23_RS06135 | Not Available | Negative | 1296914 - 1297654 | 26480.3 |
| abc transporter permease subunit | RCA23_RS06140 | Not Available | Negative | 1297651 - 1298673 | 36142.6 |
| branched-chain amino acid abc transporter permease | RCA23_RS06145 | Not Available | Negative | 1298666 - 1299559 | 31568.1 |
| abc transporter substrate-binding protein | RCA23_RS06150 | Not Available | Negative | 1299567 - 1300733 | 40849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
