Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS06000 | Not Available | Positive | 1271455 - 1271643 | 6804.14 |
| heme-binding protein | RCA23_RS06005 | Not Available | Negative | 1272199 - 1272798 | 22571.1 |
| sulfatase | RCA23_RS06010 | Not Available | Positive | 1273478 - 1274995 | 58449.4 |
| polymer-forming cytoskeletal protein | RCA23_RS16240 | Not Available | Positive | 1275244 - 1275627 | 13393.9 |
| is481 family transposase | RCA23_RS06015 | Not Available | Positive | 1275804 - 1276883 | 41054.3 |
| d-ta family plp-dependent enzyme | RCA23_RS06020 | Not Available | Negative | 1276918 - 1278006 | 39168.9 |
| glutamine synthetase family protein | RCA23_RS06025 | Not Available | Negative | 1278509 - 1279810 | 47194.7 |
| murr/rpir family transcriptional regulator | RCA23_RS06030 | Not Available | Negative | 1279807 - 1280652 | 31475.8 |
| n-formylglutamate amidohydrolase | RCA23_RS06035 | Not Available | Positive | 1280733 - 1281500 | 27970.2 |
| isochorismatase family cysteine hydrolase | RCA23_RS06040 | Not Available | Positive | 1281497 - 1282138 | 23573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
