Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS05955 | Not Available | Negative | 1261847 - 1262611 | 29631.5 |
| aldo/keto reductase | RCA23_RS05960 | Not Available | Negative | 1262811 - 1263746 | 33637.9 |
| duf3303 domain-containing protein | RCA23_RS05965 | Not Available | Positive | 1264642 - 1264917 | 9881.61 |
| hypothetical protein | RCA23_RS05970 | Not Available | Negative | 1265173 - 1265547 | 13228.4 |
| yjbh domain-containing protein | RCA23_RS16910 | Not Available | Negative | 1265875 - 1265946 | 2982.82 |
| ydei/ompd-associated family protein | RCA23_RS05975 | Not Available | Negative | 1266246 - 1266818 | 22006.3 |
| gdsl-type esterase/lipase family protein | RCA23_RS05980 | Not Available | Positive | 1267451 - 1268101 | 23790.0 |
| phytanoyl-coa dioxygenase family protein | RCA23_RS05985 | Not Available | Positive | 1268699 - 1269586 | 33335.1 |
| dimethylsulfonioproprionate lyase family protein | RCA23_RS05990 | Not Available | Positive | 1270243 - 1270815 | 21816.5 |
| hypothetical protein | RCA23_RS05995 | Not Available | Positive | 1271031 - 1271468 | 15634.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
