Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | RCA23_RS05915 | Not Available | Positive | 1251130 - 1254051 | 108985.0 |
| response regulator | RCA23_RS05920 | Not Available | Positive | 1254048 - 1256066 | 75151.3 |
| cher family methyltransferase | RCA23_RS05925 | Not Available | Positive | 1256204 - 1256908 | 27150.5 |
| cheb methylesterase domain-containing protein | RCA23_RS05930 | Not Available | Positive | 1256934 - 1257911 | 36391.5 |
| hypothetical protein | RCA23_RS16445 | Not Available | Negative | 1257963 - 1258106 | 5277.34 |
| yjbh domain-containing protein | RCA23_RS16760 | Not Available | Positive | 1258053 - 1258245 | 7013.62 |
| mbl fold metallo-hydrolase | RCA23_RS05935 | Not Available | Positive | 1258361 - 1259149 | 30059.7 |
| cyclic nucleotide-binding domain-containing protein | RCA23_RS05940 | Not Available | Positive | 1259157 - 1259498 | 12658.2 |
| is481 family transposase | RCA23_RS05945 | Not Available | Negative | 1259588 - 1260667 | 41040.2 |
| fkbm family methyltransferase | RCA23_RS05950 | Not Available | Negative | 1260729 - 1261553 | 30714.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
