Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase family protein | RCA23_RS05860 | Not Available | Positive | 1237724 - 1238692 | 35091.9 |
| abrb family transcriptional regulator | RCA23_RS05865 | Not Available | Negative | 1238756 - 1239793 | 36777.6 |
| gntr family transcriptional regulator | RCA23_RS05870 | Not Available | Negative | 1239790 - 1240440 | 24133.8 |
| fad-dependent tricarballylate dehydrogenase tcua | RCA23_RS05875 | Not Available | Positive | 1240489 - 1241970 | 52546.0 |
| pyridoxal phosphate-dependent aminotransferase | RCA23_RS05880 | Not Available | Positive | 1242188 - 1243363 | 42281.6 |
| duf3047 domain-containing protein | RCA23_RS05885 | Not Available | Negative | 1243431 - 1244084 | 24105.4 |
| yjbh domain-containing protein | RCA23_RS05890 | Not Available | Negative | 1244235 - 1245824 | 58956.7 |
| para family protein | RCA23_RS05900 | Not Available | Positive | 1247291 - 1247935 | 23780.9 |
| chemotaxis protein chew | RCA23_RS05905 | Not Available | Positive | 1247928 - 1249136 | 45347.8 |
| methyl-accepting chemotaxis protein | RCA23_RS15955 | Not Available | Positive | 1249188 - 1251065 | 68167.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
