Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | RCA23_RS05715 | Not Available | Positive | 1208316 - 1209296 | 35282.3 |
| atp-binding cassette domain-containing protein | RCA23_RS05720 | Not Available | Positive | 1209293 - 1210075 | 28469.3 |
| abc transporter atp-binding protein | RCA23_RS05725 | Not Available | Positive | 1210079 - 1210801 | 25988.6 |
| aspartate/glutamate racemase family protein | RCA23_RS05730 | Not Available | Positive | 1210808 - 1211491 | 24069.9 |
| hypothetical protein | RCA23_RS16435 | Not Available | Positive | 1211684 - 1211854 | 6151.4 |
| is6 family transposase | RCA23_RS05735 | Not Available | Positive | 1211851 - 1212558 | 28512.6 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | RCA23_RS05740 | Not Available | Negative | 1212979 - 1213785 | 29999.6 |
| ectoine/hydroxyectoine abc transporter permease subunit ehud | RCA23_RS05745 | Not Available | Negative | 1213802 - 1214500 | 26163.7 |
| hypothetical protein | RCA23_RS05750 | Not Available | Negative | 1214504 - 1214740 | 8692.91 |
| is6 family transposase | RCA23_RS05755 | Not Available | Positive | 1214805 - 1215512 | 28370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
